Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015851805.1_cds_XP_016511619.1_24341
CDS Infomation

[gene=LOC107828762] [db_xref=GeneID:107828762] [protein=squalene monooxygenase-like] [protein_id=XP_016511619.1] [location=complement(join(36918..37028,37127..37405,37754..38029,38138..38356,38593..38761,38995..39169,39307..39418,39854..40099))] [gbkey=CDS]
Sequence

ATGGTGGATATGGGTCTTTCCGGATCTGTACTTGCGGTGGTGTTTGGCTTCGTGGCAGTT
TTGTGGTTTTTCATTCAGAGAAATGGTGGCCGCAAAGATAAAAATAATGACCCCGCCACC
ACCAGCACCACTACCACAACGGTGTATGATGGAGAATGCAGATCAAAGGACGCAAACGAT
GACGCTGACATCATCATCGTCGGTGCTGGCGTTGCCGGTGCCGCTCTTGCTCACACCCTT
GGCAAAGAGGGGCGTCATGTAAAAGTGATTGAAAGAGATTTGACAGAGCCTGATCGAATT
GTTGGAGAACTCCTACAACCAGGTGGCTTCCTCAAATTGCAGGAGTTGGGTTTGGAAGAT
TGTGTGGAGAATATTGATGCTCAGCGAGTGTTCGGGTATGCTCTTTTCAAGGATGGCAAG
AGCACTCGTCTTTCTTATCCCCTGGAGAAGTTTCATGCTGATGTATCTGGGAGGAGCTTT
CACAATGGGCGTTTCATTCAAAGAATGAGAGAGAAAGCTGCATCTCTTCCCAATGTGAAA
CTGGAGCAAGGCACTGTTACGTCTCTGCTAGAAGAAAACGGGACCATTAGAGGTGTTCAG
TACAAAAACAAATCTGGTGAAGAGTTGAAAGCCTATGCACCATTGACCATAGTGTGCGAT
GGTTGTTTCTCGAATCTACGGCGTACACTTTGTGACCCAAAGGTAGAAGTGCCTTCTTGT
TTTGTTGGTCTGGTCCTGGAGAACTGCCAGCTTCCACATGCAAACCATGGACATGTCATT
TTGGCTGATCCATCACCTATCCTGTTCTACCCCATAAGCAGTACTGAGGTCCGTTGCCTT
GTTGATGTACCTGGTCAAAAAGTGCCTTCTATTTCAAATGGTGAAATGGCCAAATATTTG
AAAAGCGTCGTCGCTCCCCAGGTGCCTCCTGAGATAAAAGATGCATTCATTGCTGCAATT
GATAAAGGGAACATCAGAACAATGCCAAACCGAAGCATGCCAGCTGCTCCTCATCCAACT
CCTGGTGCTCTTCTCATGGGAGATGCATTCAACATGCGCCATCCCTTGACTGGTGGAGGA
ATGACTGTAGCATTGTCTGATATTGTTGTATTACGTGATCTTCTTAAACCTCTTCGTGAT
TTGAATGATGCACCTACTCTTTGTAGATATCTGGAGTCCTTTTACACCTTGCGTAAGCCG
GTGGCATCTACCATCAATACATTGGCTGGTGCATTGTATAAGGTGTTTTGTGCTTCACCT
GATCAAGCTAGGAAGGAGATGCGCGATGCATGCTTTGACTATTTGAGCCTTGGTGGAGTA
TTCTCCACAGGACCTGTATCTTTGCTTTCTGGCTTAAACCCTCGTCCATTAAGTCTCGTT
TGTCACTTCTTTGCTGTGGCTATCTATGGTGTTGGCCGCTTGCTGCTGCCTTTCCCATCA
CCCAAACGTATGTGGATTGGAGCCCGGCTGATCTCGGGTGCATCTGGAATTATTTTCCCT
ATCATCAAGGCAGAAGGAGTGAGGCAGATGTTCTTCCCCGCTACTGTTCCTGCATATTAC
AGGTCTCCTCCTGAAGTGAAATTGTAA

Peptide Sequence

PEP ID

XP_016511619.1
PEP Infomation

PREDICTED: squalene monooxygenase-like [Nicotiana tabacum]
Sequence

MVDMGLSGSVLAVVFGFVAVLWFFIQRNGGRKDKNNDPATTSTTTTTVYDGECRSKDAND
DADIIIVGAGVAGAALAHTLGKEGRHVKVIERDLTEPDRIVGELLQPGGFLKLQELGLED
CVENIDAQRVFGYALFKDGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVK
LEQGTVTSLLEENGTIRGVQYKNKSGEELKAYAPLTIVCDGCFSNLRRTLCDPKVEVPSC
FVGLVLENCQLPHANHGHVILADPSPILFYPISSTEVRCLVDVPGQKVPSISNGEMAKYL
KSVVAPQVPPEIKDAFIAAIDKGNIRTMPNRSMPAAPHPTPGALLMGDAFNMRHPLTGGG
MTVALSDIVVLRDLLKPLRDLNDAPTLCRYLESFYTLRKPVASTINTLAGALYKVFCASP
DQARKEMRDACFDYLSLGGVFSTGPVSLLSGLNPRPLSLVCHFFAVAIYGVGRLLLPFPS
PKRMWIGARLISGASGIIFPIIKAEGVRQMFFPATVPAYYRSPPEVKL

Transcript Sequence

Gene sequence data has not been registered.